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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015821684.1_cds_XP_016500850.1_14642
CDS Infomation

[gene=LOC107819267] [db_xref=GeneID:107819267] [protein=glucose-6-phosphate isomerase 1, chloroplastic-like] [protein_id=XP_016500850.1] [location=join(1142..1672,2142..2258,3144..3242,3339..3422,3719..3862,4239..4304,4528..4596,4695..4802,5644..5696,5858..5996,6412..6568,6794..6872,7002..7068,7163..7297)] [gbkey=CDS]
Sequence

ATGGCTTCTTCTTCACTCTCTAGCATCTACTCCCCTTCTTCCTCTTCATCTTTCAAAACT
GAAGTGAAATCAATTCACAAAATCACTTCTTCCCAATTGGGTTTAATCTCCCTGCCCGGA
AAATCAAGATTCCATGTTCGCGCGGTGGCGCGTGAGTTATCCACCGGCGGCAACAACGAC
GTCGTATTGAAGAAGAAGGAGAACATTGGGTTAGAGAAAGACCCAAAGTCCCTATGGAAG
AGATATGTAGACTGGCTTTACCAGCACAAGGAGTTGGGCTTGTATTTGGATATCAGTCGG
GTCGGGTTTTCCGACGAGTTTCTTGAGGAAATGGAGCCCCGGTTGCAGAAGGCGTTTAAG
GACATGGTGGAATTGGAAAAAGGTGCAATTGCAAACCCAGATGAGGGAAGAATGGTGGGT
CATTACTGGCTGAGGAGTCCTCATCTTGCTCCTAACTCATTTCTCCGGTTGCAGATTGAG
AATACTCTTGAATCTGTTTGTCAGTTTGCTAATGATGTCGTCAGTGGTAAGATCAAGACT
CCTTCTGGTAGCCTATTTACGCAAATTCTTTCTGTTGGAATTGGTGGTTCAGCGCTTGGA
CCGCAATTTGTGGCTGAGGCATTGGCTCCTGACAACCCTCCTCTGAAGATAAGATTCATC
GACAACACAGATCCAGCAGGCATTGATCATCAAATTGCACAACTTGGGCCTGAGCTGGCT
TCAACACTTGTTATTGTTATTTCAAAGAGTGGAGGCACTCCAGAAACCCGAAATGGCTTG
TTAGAAGTTCAGAAGGCCTTTCGTGAAGCTGGCCTGGAATTTGCAAAACAGGGTGTTGCC
ATTACACAAGAGAACTCTTTGCTTGACAACACCGCTAGAATTGAGGGTTGGTTAGCCAGA
TTCCCTATGTTTGATTGGGTGGGTGGAAGAACCTCTGAATTGTCTGCAGTTGGTTTACTT
CCGGCTGCACTTCAGGGAATTAATATCAGAGAGATGCTCACTGGCGCTGCATTGATGGAC
GAAGCAAACAGGATAACTGTGGTTCGGGATAACCCAGCAGCTCTGCTTGCTTTGTGTTGG
TACTGGGCCACTGATGGAGTTGGATCCAAGGATATGGTTGTCCTCCCGTACAAGGACAGT
TTATTACTATTCAGTAGGTATTTACAGCAGCTTGTCATGGAGTCTCTTGGCAAAGAGTTT
GACCTGGATGGAAACCGGGTGAATCAAGGGATCAGCGTGTATGGAAACAAAGGGAGTACA
GATCAGCATGCCTATATCCAACAACTCCGAGAAGGCGTGCACAATTTCTTTGCAACATTT
ATTGAAGTATTGCGTGATAGGCCCCCTGGTCATGATTGGGAGCTTGAACCTGGTGTTACC
TGTGGTGACTACCTCTTTGGAATGTTACAGGGAACGAGGTCGGCTCTATATGCGAATGAT
AGAGAGTCCATCACAGTCACTGTGCAGGAAGTGACACCTAGATCTGTTGGAGCTCTAGTA
GCACTCTACGAGCGAGCTGTTGGGATTTATGCCTCACTTGTTAACATTAACGCTTATCAT
CAACCTGGTGTGGAAGCTGGCAAAAAAGCCGCTGGAGAAGTTCTTGCGCTTCAAAAGCGT
GTCCTTGCTGTACTCAATGAGGCCAGCTGTAAAGAGCCTGTTGAACCACTTACACTAGAC
GAAATAGCTGAGCGTTGTCATTGTGAAGAAGATATCGAAATGATCTATAAGATTATTGCA
CACATGGCTGCTAATGACAGAGCTCTTATTGCCGAAGGTAGTTGTGGTTCTCCTCGGAGT
GTAAAAGTTTATCTGGGCGAGTGTAATGTTGACGAGTTATATGCCTAG

Peptide Sequence

PEP ID

XP_016500850.1
PEP Infomation

PREDICTED: glucose-6-phosphate isomerase 1, chloroplastic-like [Nicotiana tabacum]
Sequence

MASSSLSSIYSPSSSSSFKTEVKSIHKITSSQLGLISLPGKSRFHVRAVARELSTGGNND
VVLKKKENIGLEKDPKSLWKRYVDWLYQHKELGLYLDISRVGFSDEFLEEMEPRLQKAFK
DMVELEKGAIANPDEGRMVGHYWLRSPHLAPNSFLRLQIENTLESVCQFANDVVSGKIKT
PSGSLFTQILSVGIGGSALGPQFVAEALAPDNPPLKIRFIDNTDPAGIDHQIAQLGPELA
STLVIVISKSGGTPETRNGLLEVQKAFREAGLEFAKQGVAITQENSLLDNTARIEGWLAR
FPMFDWVGGRTSELSAVGLLPAALQGINIREMLTGAALMDEANRITVVRDNPAALLALCW
YWATDGVGSKDMVVLPYKDSLLLFSRYLQQLVMESLGKEFDLDGNRVNQGISVYGNKGST
DQHAYIQQLREGVHNFFATFIEVLRDRPPGHDWELEPGVTCGDYLFGMLQGTRSALYAND
RESITVTVQEVTPRSVGALVALYERAVGIYASLVNINAYHQPGVEAGKKAAGEVLALQKR
VLAVLNEASCKEPVEPLTLDEIAERCHCEEDIEMIYKIIAHMAANDRALIAEGSCGSPRS
VKVYLGECNVDELYA

Transcript Sequence

Gene sequence data has not been registered.